BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B10LP1|AL430007
(945 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1804 0.0
>3x_Contig1388
Length = 8256
Score = 1804 bits (909), Expect = 0.0
Identities = 939/946 (99%), Gaps = 3/946 (0%)
Strand = Plus / Minus
Query: 1 gatctcacagggcagattggaatcgcttttgaattaccagactgtggtgtcagatttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3316 gatctcacagggcagattggaatcgcttttgaattaccagactgtggtgtcagatttgac 3257
Query: 61 tgggttaccggtggccaatgcgtcgttgttggatgagggtacagctgctggtgaagcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3256 tgggttaccggtggccaatgcgtcgttgttggatgagggtacagctgctggtgaagcgat 3197
Query: 121 gctgttatctttcaacgttgccaagaagaagaaactcacttacgttatagataagagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3196 gctgttatctttcaacgttgccaagaagaagaaactcacttacgttatagataagagatt 3137
Query: 181 gcataaacagacgaagtcgttncattaagacaagaaccgaacctttcgggatcaagttgg 240
|||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 3136 gcataaacagacgaagtctgtgc-ttaagacaagaaccgaacctttcgggatcaagttgg 3078
Query: 241 ttgaagttgatccattggatgaatcgacttggtccgttctatcatctgataaagatgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3077 ttgaagttgatccattggatgaatcgacttggtccgttctatcatctgataaagatgtct 3018
Query: 301 ccggttgtttggttcaatatccagatacagagggtaatatcatccctggtgagacactag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3017 ccggttgtttggttcaatatccagatacagagggtaatatcatccctggtgagacactag 2958
Query: 361 ccaagttggcagatatagtacaccaatctaagggtttgtttgccgtggcatccgatcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2957 ccaagttggcagatatagtacaccaatctaagggtttgtttgccgtggcatccgatcttt 2898
Query: 421 tggctttgactcttttgaaaccccctgctcaatttggtgctgatattgttcttggatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2897 tggctttgactcttttgaaaccccctgctcaatttggtgctgatattgttcttggatcat 2838
Query: 481 cgcaaagattcggggtaccattcggttatggtggcccacacgctgcattcttctctgtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2837 cgcaaagattcggggtaccattcggttatggtggcccacacgctgcattcttctctgtta 2778
Query: 541 ttgagaagttgaacagaaagatcccagggagaatcgttggtgtttccaaggatcgtttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2777 ttgagaagttgaacagaaagatcccagggagaatcgttggtgtttccaaggatcgtttgg 2718
Query: 601 gtaaacctgctttacgtctcgcattacaaaccagagagcaacacatcaagcgtgataagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2717 gtaaacctgctttacgtctcgcattacaaaccagagagcaacacatcaagcgtgataagg 2658
Query: 661 ctacttcaaatatttgtactgcacaagcgctcttggctaatattgctgcaaactactgtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 ctacttcaaatatttgtactgcacaagcgctcttggctaatattgctgcaaactactgtg 2598
Query: 721 tttaccatggcccacaaggtctaaaagaaattgctggcagagtttacggattcacaaccg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 tttaccatggcccacaaggtctaaaagaaattgctggcagagtttacggattcacaaccg 2538
Query: 781 tattggccaatgggttatcatcttcaaaccatactttgttgaacaaatcgtggtttgata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 tattggccaatgggttatcatcttcaaaccatactttgttgaacaaatcgtggtttgata 2478
Query: 841 ctttgactgttgag-twaacggaatctccgcacaagatttcataaagactgcggtcgaca 899
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 ctttgactgttgagttaaacggaatctccgcacaagatttcataaagactgcggtcgaca 2418
Query: 900 aatatcaaatcaatttataccaagtcaataatgaaa-cgtttcatt 944
|||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2417 aatatcaaatcaatttataccaagtcaataatgaaaccgtttcatt 2372
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7249
Number of Sequences: 1807
Number of extensions: 7249
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)